NiaPy

NiaPy

轻量级自然启发算法Python框架

NiaPy是一个开源的Python微框架,用于构建和评估自然启发算法。它内置了多种优化问题和算法实现,通过简洁的接口实现算法比较和结果导出。NiaPy支持pip、conda等安装方式,兼容主流Linux发行版,适用于Python 3.9及以上版本。该框架为优化研究和应用提供了一个灵活高效的开发平台。

NiaPy优化算法Python开源软件自然启发算法Github开源项目
<p align="center"><img src=".github/imgs/NiaPyLogo.png" alt="NiaPy" title="NiaPy"/></p>

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DOI DOI

Nature-inspired algorithms are a very popular tool for solving optimization problems. Numerous variants of nature-inspired algorithms have been developed (paper 1, paper 2) since the beginning of their era. To prove their versatility, those were tested in various domains on various applications, especially when they are hybridized, modified or adapted. However, implementation of nature-inspired algorithms is sometimes a difficult, complex and tedious task. In order to break this wall, NiaPy is intended for simple and quick use, without spending time for implementing algorithms from scratch.

Mission

Our mission is to build a collection of nature-inspired algorithms and create a simple interface for managing the optimization process. NiaPy offers:

  • numerous optimization problem implementations,
  • use of various nature-inspired algorithms without struggle and effort with a simple interface,
  • easy comparison between nature-inspired algorithms, and
  • export of results in various formats such as Pandas DataFrame, JSON or even Excel.

Installation

Install NiaPy with pip:

pip install niapy

To install NiaPy with conda, use:

conda install -c niaorg niapy

To install NiaPy on Fedora, use:

dnf install python3-niapy

To install NiaPy on Arch Linux, please use an AUR helper:

yay -Syyu python-niapy

To install NiaPy on Alpine Linux, please enable Community repository and use:

apk add py3-niapy

To install NiaPy on NixOS, please use:

nix-env -iA nixos.python310Packages.niapy

To install NiaPy on Void Linux, use:

xbps-install -S python3-niapy

Install from source

In case you want to install directly from the source code, use:

pip install git+https://github.com/NiaOrg/NiaPy.git

Algorithms

Click here for the list of implemented algorithms.

Problems

Click here for the list of implemented test problems.

Usage

After installation, you can import NiaPy as any other Python module:

$ python >>> import niapy >>> niapy.__version__

Let's go through a basic and advanced example.

Basic Example

Let’s say, we want to try out PSO against the Pintér problem function. Firstly, we have to create new file, with name, for example basic_example.py. Then we have to import chosen algorithm from NiaPy, so we can use it. Afterwards we initialize ParticleSwarmAlgorithm class instance and run the algorithm. Given bellow is the complete source code of basic example.

from niapy.algorithms.basic import ParticleSwarmAlgorithm from niapy.task import Task # we will run 10 repetitions of Weighted, velocity clamped PSO on the Pinter problem for i in range(10): task = Task(problem='pinter', dimension=10, max_evals=10000) algorithm = ParticleSwarmAlgorithm(population_size=100, w=0.9, c1=0.5, c2=0.3, min_velocity=-1, max_velocity=1) best_x, best_fit = algorithm.run(task) print(best_fit)

Given example can be run with python basic_example.py command and should give you similar output as following:

0.008773534890863646 0.036616190934621755 186.75116812592546 0.024186452828927896 263.5697469837348 45.420706924365916 0.6946753611091367 7.756100204780568 5.839673314425907 0.06732518679742806

Advanced Example

In this example we will show you how to implement a custom problem class and use it with any of implemented algorithms. First let's create new file named advanced_example.py. As in the previous examples we wil import algorithm we want to use from niapy module.

For our custom optimization function, we have to create new class. Let's name it MyProblem. In the initialization method of MyProblem class we have to set the dimension, lower and upper bounds of the problem. Afterwards we have to override the abstract method _evaluate which takes a parameter x, the solution to be evaluated, and returns the function value. Now we should have something similar as is shown in code snippet bellow.

import numpy as np from niapy.task import Task from niapy.problems import Problem from niapy.algorithms.basic import ParticleSwarmAlgorithm # our custom problem class class MyProblem(Problem): def __init__(self, dimension, lower=-10, upper=10, *args, **kwargs): super().__init__(dimension, lower, upper, *args, **kwargs) def _evaluate(self, x): return np.sum(x ** 2)

Now, all we have to do is to initialize our algorithm as in previous examples and pass an instance of our MyProblem class as the problem argument.

my_problem = MyProblem(dimension=20) for i in range(10): task = Task(problem=my_problem, max_iters=100) algo = ParticleSwarmAlgorithm(population_size=100, w=0.9, c1=0.5, c2=0.3, min_velocity=-1, max_velocity=1) # running algorithm returns best found minimum best_x, best_fit = algo.run(task) # printing best minimum print(best_fit)

Now we can run our advanced example with following command: python advanced_example.py. The results should be similar to those bellow.

0.002455614050761476 0.000557652972392164 0.0029791325679865413 0.0009443595274525336 0.001012658824492069 0.0006837236892816072 0.0026789725774685495 0.005017746993004601 0.0011654473402322196 0.0019074442166293853

For more usage examples please look at examples folder.

More advanced examples can also be found in the NiaPy-examples repository.

Cite us

Are you using NiaPy in your project or research? Please cite us!

Plain format

      Vrbančič, G., Brezočnik, L., Mlakar, U., Fister, D., & Fister Jr., I. (2018).
      NiaPy: Python microframework for building nature-inspired algorithms.
      Journal of Open Source Software, 3(23), 613\. <https://doi.org/10.21105/joss.00613>

Bibtex format

    @article{NiaPyJOSS2018,
        author  = {Vrban{\v{c}}i{\v{c}}, Grega and Brezo{\v{c}}nik, Lucija
                  and Mlakar, Uro{\v{s}} and Fister, Du{\v{s}}an and {Fister Jr.}, Iztok},
        title   = {{NiaPy: Python microframework for building nature-inspired algorithms}},
        journal = {{Journal of Open Source Software}},
        year    = {2018},
        volume  = {3},
        issue   = {23},
        issn    = {2475-9066},
        doi     = {10.21105/joss.00613},
        url     = {https://doi.org/10.21105/joss.00613}
    }

RIS format

    TY  - JOUR
    T1  - NiaPy: Python microframework for building nature-inspired algorithms
    AU  - Vrbančič, Grega
    AU  - Brezočnik, Lucija
    AU  - Mlakar, Uroš
    AU  - Fister, Dušan
    AU  - Fister Jr., Iztok
    PY  - 2018
    JF  - Journal of Open Source Software
    VL  - 3
    IS  - 23
    DO  - 10.21105/joss.00613
    UR  - http://joss.theoj.org/papers/10.21105/joss.00613

Contributors ✨

Thanks goes to these wonderful people (emoji key):

<!-- ALL-CONTRIBUTORS-LIST:START - Do not remove or modify this section --> <!-- prettier-ignore-start --> <!-- markdownlint-disable --> <table> <tr> <td align="center"><a href="https://github.com/GregaVrbancic"><img src="https://avatars0.githubusercontent.com/u/1894788?v=4?s=100" width="100px;" alt=""/><br /><sub><b>Grega Vrbančič</b></sub></a><br /><a href="https://github.com/NiaOrg/NiaPy/commits?author=GregaVrbancic" title="Code">💻</a> <a href="https://github.com/NiaOrg/NiaPy/commits?author=GregaVrbancic" title="Documentation">📖</a> <a href="https://github.com/NiaOrg/NiaPy/issues?q=author%3AGregaVrbancic" title="Bug reports">🐛</a> <a href="#example-GregaVrbancic" title="Examples">💡</a> <a href="#maintenance-GregaVrbancic" title="Maintenance">🚧</a> <a href="#platform-GregaVrbancic" title="Packaging/porting to new platform">📦</a> <a href="#projectManagement-GregaVrbancic" title="Project Management">📆</a> <a href="https://github.com/NiaOrg/NiaPy/pulls?q=is%3Apr+reviewed-by%3AGregaVrbancic" title="Reviewed Pull Requests">👀</a></td> <td align="center"><a href="https://github.com/firefly-cpp"><img src="https://avatars2.githubusercontent.com/u/1633361?v=4?s=100" width="100px;" alt=""/><br /><sub><b>firefly-cpp</b></sub></a><br /><a href="https://github.com/NiaOrg/NiaPy/commits?author=firefly-cpp" title="Code">💻</a> <a href="https://github.com/NiaOrg/NiaPy/commits?author=firefly-cpp" title="Documentation">📖</a> <a href="https://github.com/NiaOrg/NiaPy/issues?q=author%3Afirefly-cpp" title="Bug reports">🐛</a> <a href="#example-firefly-cpp" title="Examples">💡</a> <a href="https://github.com/NiaOrg/NiaPy/pulls?q=is%3Apr+reviewed-by%3Afirefly-cpp" title="Reviewed Pull Requests">👀</a> <a href="#question-firefly-cpp" title="Answering Questions">💬</a> <a href="https://github.com/NiaOrg/NiaPy/commits?author=firefly-cpp" title="Tests">⚠️</a> <a href="#platform-firefly-cpp" title="Packaging/porting to new platform">📦</a></td> <td align="center"><a href="https://github.com/lucijabrezocnik"><img src="https://avatars2.githubusercontent.com/u/36370699?v=4?s=100" width="100px;" alt=""/><br /><sub><b>Lucija Brezočnik</b></sub></a><br /><a href="https://github.com/NiaOrg/NiaPy/commits?author=lucijabrezocnik" title="Code">💻</a> <a href="https://github.com/NiaOrg/NiaPy/commits?author=lucijabrezocnik" title="Documentation">📖</a> <a href="https://github.com/NiaOrg/NiaPy/issues?q=author%3Alucijabrezocnik" title="Bug reports">🐛</a> <a href="#example-lucijabrezocnik" title="Examples">💡</a></td> <td align="center"><a href="https://github.com/mlaky88"><img src="https://avatars1.githubusercontent.com/u/23091578?v=4?s=100" width="100px;" alt=""/><br /><sub><b>mlaky88</b></sub></a><br /><a href="https://github.com/NiaOrg/NiaPy/commits?author=mlaky88" title="Code">💻</a> <a href="https://github.com/NiaOrg/NiaPy/commits?author=mlaky88" title="Documentation">📖</a> <a href="#example-mlaky88" title="Examples">💡</a></td> <td align="center"><a href="https://github.com/rhododendrom"><img src="https://avatars1.githubusercontent.com/u/3198785?v=4?s=100" width="100px;" alt=""/><br /><sub><b>rhododendrom</b></sub></a><br /><a href="https://github.com/NiaOrg/NiaPy/commits?author=rhododendrom" title="Code">💻</a> <a href="https://github.com/NiaOrg/NiaPy/commits?author=rhododendrom" title="Documentation">📖</a> <a href="#example-rhododendrom" title="Examples">💡</a> <a href="https://github.com/NiaOrg/NiaPy/issues?q=author%3Arhododendrom" title="Bug reports">🐛</a> <a href="https://github.com/NiaOrg/NiaPy/pulls?q=is%3Apr+reviewed-by%3Arhododendrom" title="Reviewed Pull Requests">👀</a></td> <td align="center"><a href="https://github.com/kb2623"><img src="https://avatars3.githubusercontent.com/u/7480221?s=460&v=4?s=100" width="100px;" alt=""/><br /><sub><b>Klemen</b></sub></a><br /><a

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